USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q8WVK2 USC-OGP 2-DE database:  Q8WVK2 Q8WVK2 General information about the entry View entry in simple text format Entry name SNR27_HUMAN Primary accession number Q8WVK2 Secondary accession number(s) Q15410 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein; Short=U4/U6.U5 snRNP 27 kDa protein; Short=U4/U6.U5-27K; AltName: Full=Nucleic acid-binding protein RY-1; AltName: Full=U4/U6.U5 tri-snRNP-associated 27 kDa protein; Short=27K; AltName: Full=U4/U6.U5 tri-snRNP-associated protein 3;. Gene name Name=SNRNP27 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1310: pI=6.61; Mw=22180 Cross-references UniProtKB/Swiss-Prot Q8WVK2; SNR27_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name SNR27_HUMAN Primary accession number Q8WVK2 Secondary accession number(s) Q15410 Sequence was last modified on  March 1, 2002 (version 1) Annotations were last modified on  March 15, 2017 (version 119) Name and origin of the protein Description RecName: Full=U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein; Short=U4/U6.U5 snRNP 27 kDa protein; Short=U4/U6.U5-27K; AltName: Full=Nucleic acid-binding protein RY-1; AltName: Full=U4/U6.U5 tri-snRNP-associated 27 kDa protein; Short=27K; AltName: Full=U4/U6.U5 tri-snRNP-associated protein 3; Gene name Name=SNRNP27 Encoded on Name=SNRNP27 Keywords Complete proteome; Direct protein sequencing; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X76302; CAA53949.1; ALT_INIT; mRNA EMBL AC019206; AAY14866.1; -; Genomic_DNA EMBL BC017890; AAH17890.1; -; mRNA CCDS CCDS33219.1; -; . PIR I38191; I38191; . RefSeq NP_006848.1; NM_006857.2; . UniGene Hs.54649; -; . ProteinModelPortal Q8WVK2; -; . BioGrid 116207; 111; . IntAct Q8WVK2; 9; . MINT MINT-4774420; -; . STRING 9606.ENSP00000244227; -; . iPTMnet Q8WVK2; -; . PhosphoSitePlus Q8WVK2; -; . BioMuta SNRNP27; -; . DMDM 74760570; -; . EPD Q8WVK2; -; . MaxQB Q8WVK2; -; . PaxDb Q8WVK2; -; . PeptideAtlas Q8WVK2; -; . PRIDE Q8WVK2; -; . DNASU 11017; -; . Ensembl ENST00000244227; ENSP00000244227; ENSG00000124380; . Ensembl ENST00000450162; ENSP00000395144; ENSG00000124380; . GeneID 11017; -; . KEGG hsa:11017; -; . UCSC uc002sfw.4; human; . CTD 11017; -; . DisGeNET 11017; -; . GeneCards SNRNP27; -; . HGNC HGNC:30240; SNRNP27; . HPA HPA034541; -; . neXtProt NX_Q8WVK2; -; . OpenTargets ENSG00000124380; -; . PharmGKB PA164726114; -; . eggNOG KOG3263; Eukaryota; . eggNOG ENOG410XWWQ; LUCA; . GeneTree ENSGT00730000111237; -; . HOGENOM HOG000089971; -; . HOVERGEN HBG094639; -; . InParanoid Q8WVK2; -; . KO K12846; -; . OMA KMMGFAS; -; . TreeFam TF314458; -; . Reactome R-HSA-72163; mRNA Splicing - Major Pathway; . ChiTaRS SNRNP27; human; . GenomeRNAi 11017; -; . PRO PR:Q8WVK2; -; . Proteomes UP000005640; Chromosome 2; . Bgee ENSG00000124380; -; . CleanEx HS_SNRNP27; -; . ExpressionAtlas Q8WVK2; baseline and differential; . Genevisible Q8WVK2; HS; . GO GO:0005654; C:nucleoplasm; TAS:Reactome; . GO GO:0003676; F:nucleic acid binding; NAS:UniProtKB; . GO GO:0000398; P:mRNA splicing; via spliceosome; TAS:Reactome InterPro IPR013957; DUF1777; . Pfam PF08648; DUF1777; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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